PDBsum entry 2grx

Pore analysis for: 2grx calculated with

MOLE 2.0

PDB id

2grx

Pores calculated on whole structure

Pores calculated excluding ligands

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13 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.16

2.08

31.4

-1.56

-0.36

16.7

90

2

2

3

4

1

0

0

2

1.16

2.05

34.0

-1.72

-0.18

24.6

81

5

2

2

6

1

1

0

3

1.93

2.07

34.8

-2.49

-0.54

25.2

83

6

4

4

2

2

1

0

4

2.03

2.27

35.1

-2.10

-0.49

21.4

80

6

2

3

2

1

2

0

5

1.93

2.07

35.7

-2.12

-0.67

17.7

90

4

3

5

1

1

1

0

6

1.59

2.19

36.0

-1.16

0.08

2.8

69

1

0

7

0

10

0

0

FCI 1050 B

7

1.18

2.05

37.8

-1.49

-0.35

20.6

87

4

2

3

5

0

1

0

8

1.97

2.77

48.3

-2.09

-0.52

22.9

77

6

3

5

3

1

3

0

9

1.24

1.39

104.3

-1.77

-0.41

16.7

78

7

8

15

5

9

1

0

FCI 1050 B

10

1.47

2.49

29.0

-1.64

-0.35

21.8

76

5

1

2

2

1

2

0

11

1.60

2.31

43.6

-1.21

-0.05

4.5

69

3

0

7

0

10

0

0

FCI 1050 A

12

1.40

1.53

47.6

-1.78

-0.71

17.7

87

4

4

4

2

1

1

0

13

1.12

1.39

126.9

-1.79

-0.36

16.8

79

11

9

15

5

12

1

0

FCI 1050 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.