PDBsum entry 2gp9 Go to PDB code:  Tunnel analysis for: 2gp9 calculated with MOLE 2.0 PDB id 2gp9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 2.06 24.2 -0.07 0.03 10.5 80 2 1 1 6 3 0 0   2 1.17 2.06 25.6 0.08 -0.04 8.2 82 2 1 1 6 2 1 0   3 1.24 1.24 27.9 -0.58 -0.40 8.4 80 1 3 3 5 2 1 0   4 1.23 1.23 33.2 -0.49 -0.26 9.4 77 2 3 3 5 3 1 0   5 1.13 2.60 36.5 -0.31 -0.16 10.3 74 3 0 3 5 4 0 0   6 1.12 2.60 37.9 -0.32 -0.19 9.8 76 3 0 3 5 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.