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PDBsum entry 2gnu

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2gnu calculated with MOLE 2.0 PDB id
2gnu
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.72 5.07 26.0 0.20 0.62 10.6 80 3 0 2 5 5 0 0  BCL 1282 L BCL 1283 L BPH 1284 M BCL 1303 M
2 1.68 2.72 37.1 -0.09 0.60 14.4 76 4 0 3 7 5 0 0  BCL 1282 L BCL 1302 M BCL 1303 M BPH 1304 M
3 2.81 4.32 41.5 0.89 0.85 9.0 70 4 0 1 9 7 0 0  BCL 1282 L BCL 1283 L BPH 1284 M BCL 1302 M BCL
1303 M BPH 1304 M
4 1.51 1.51 49.5 0.95 0.51 6.3 78 2 2 0 13 7 0 0  LDA 1310 H BCL 1282 L BCL 1283 L BPH 1284 M U10
1305 M

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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