PDBsum entry 2gmh Go to PDB code:  Tunnel analysis for: 2gmh calculated with MOLE 2.0 PDB id 2gmh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.39 70.3 0.78 0.34 6.1 79 3 1 1 17 5 4 1  UQ5 612 A FAD 614 B UQ5 615 B 2 1.34 1.96 17.4 -1.56 -0.44 16.4 84 5 0 2 1 0 1 0   3 1.10 1.52 19.5 -0.55 -0.08 9.5 89 3 1 3 3 1 0 0  EDO 622 A 4 1.36 2.01 25.5 -1.41 -0.16 14.2 79 5 1 1 1 2 1 0   5 1.22 1.22 15.5 -1.69 -0.61 14.8 82 1 2 2 0 1 0 1   6 1.18 1.80 24.0 1.51 0.41 8.3 77 2 2 1 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.