spacer
spacer

PDBsum entry 2gl7

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 2gl7 calculated with MOLE 2.0 PDB id
2gl7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.18 16.7 -2.49 -0.31 29.6 75 1 3 1 1 1 0 0  
2 1.27 2.92 19.8 0.16 -0.04 15.8 83 1 2 1 5 0 0 1  
3 1.46 1.59 15.7 2.88 0.81 0.7 81 0 0 0 9 0 0 0  
4 1.15 1.16 17.0 2.26 0.57 4.4 84 0 1 1 10 0 0 0  
5 1.14 1.19 30.1 0.98 0.15 10.8 85 1 3 1 10 0 0 0  
6 1.26 1.28 15.1 -1.76 -0.73 15.2 89 2 0 3 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer