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PDBsum entry 2gfb
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Tunnel analysis for: 2gfb calculated with  MOLE 2.0
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PDB id
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2gfb
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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33 tunnels,
coloured by tunnel radius |
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33 tunnels,
coloured by
tunnel radius
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33 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.36 |
1.35 |
36.7 |
-0.67 |
-0.37 |
4.2 |
89 |
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1 |
0 |
5 |
3 |
3 |
1 |
0 |
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2 |
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1.35 |
1.35 |
42.9 |
-0.87 |
-0.55 |
9.9 |
97 |
2 |
1 |
7 |
4 |
1 |
0 |
0 |
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3 |
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1.35 |
1.36 |
45.5 |
-0.82 |
-0.51 |
10.6 |
97 |
3 |
2 |
7 |
4 |
1 |
0 |
0 |
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4 |
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1.35 |
1.35 |
48.5 |
-0.84 |
-0.40 |
5.2 |
96 |
1 |
0 |
8 |
4 |
2 |
1 |
0 |
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5 |
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1.34 |
1.39 |
49.7 |
-0.96 |
-0.63 |
6.9 |
99 |
3 |
0 |
7 |
4 |
1 |
0 |
0 |
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6 |
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1.33 |
1.37 |
57.7 |
-1.13 |
-0.53 |
8.8 |
90 |
6 |
0 |
6 |
4 |
2 |
2 |
0 |
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7 |
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1.35 |
1.41 |
58.3 |
-1.22 |
-0.60 |
14.5 |
92 |
5 |
5 |
10 |
5 |
1 |
1 |
0 |
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8 |
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1.35 |
1.40 |
65.0 |
-0.90 |
-0.42 |
7.8 |
84 |
1 |
3 |
5 |
4 |
3 |
3 |
0 |
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9 |
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1.32 |
1.35 |
67.5 |
-1.23 |
-0.58 |
13.7 |
87 |
5 |
4 |
6 |
6 |
3 |
2 |
0 |
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10 |
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1.37 |
1.41 |
68.0 |
-1.15 |
-0.45 |
11.2 |
94 |
4 |
1 |
9 |
7 |
3 |
0 |
0 |
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11 |
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1.36 |
1.40 |
84.9 |
-1.16 |
-0.35 |
7.0 |
87 |
6 |
0 |
8 |
4 |
4 |
2 |
0 |
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12 |
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1.08 |
1.08 |
33.0 |
-1.26 |
0.03 |
9.4 |
80 |
2 |
1 |
3 |
2 |
2 |
2 |
0 |
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13 |
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1.10 |
1.10 |
37.8 |
-0.93 |
-0.20 |
10.9 |
88 |
1 |
2 |
4 |
3 |
2 |
1 |
0 |
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14 |
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1.10 |
1.10 |
47.2 |
-0.94 |
-0.32 |
11.8 |
88 |
4 |
3 |
5 |
4 |
3 |
1 |
0 |
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15 |
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1.10 |
1.09 |
49.6 |
-0.93 |
-0.16 |
8.6 |
79 |
3 |
1 |
2 |
2 |
3 |
2 |
0 |
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16 |
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1.09 |
1.08 |
51.1 |
-0.90 |
-0.37 |
8.8 |
87 |
2 |
1 |
6 |
6 |
2 |
1 |
0 |
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17 |
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1.12 |
1.13 |
52.5 |
-1.43 |
-0.45 |
15.1 |
86 |
5 |
3 |
3 |
3 |
1 |
1 |
0 |
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18 |
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1.21 |
1.17 |
52.7 |
-0.91 |
-0.33 |
9.1 |
89 |
2 |
1 |
6 |
5 |
2 |
2 |
0 |
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19 |
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1.16 |
1.12 |
56.0 |
-0.96 |
-0.28 |
10.7 |
84 |
3 |
2 |
4 |
5 |
2 |
2 |
0 |
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20 |
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1.24 |
1.18 |
68.7 |
-1.00 |
-0.26 |
11.9 |
78 |
4 |
5 |
2 |
4 |
5 |
2 |
0 |
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21 |
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1.15 |
1.11 |
70.9 |
-1.27 |
-0.30 |
12.4 |
80 |
4 |
3 |
3 |
5 |
4 |
3 |
0 |
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22 |
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1.18 |
1.12 |
78.5 |
-1.22 |
-0.48 |
14.1 |
88 |
4 |
5 |
8 |
6 |
2 |
2 |
0 |
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23 |
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1.30 |
1.23 |
88.5 |
-1.62 |
-0.49 |
22.0 |
83 |
5 |
8 |
6 |
7 |
2 |
4 |
0 |
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24 |
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1.37 |
1.30 |
91.3 |
-1.25 |
-0.43 |
17.3 |
84 |
2 |
10 |
7 |
8 |
4 |
4 |
0 |
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25 |
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1.38 |
1.73 |
21.9 |
-2.66 |
-0.70 |
24.3 |
89 |
2 |
1 |
2 |
0 |
0 |
0 |
0 |
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26 |
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1.09 |
1.32 |
17.1 |
-0.31 |
-0.38 |
4.8 |
76 |
0 |
2 |
3 |
3 |
1 |
2 |
0 |
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27 |
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1.19 |
2.75 |
20.8 |
0.02 |
-0.16 |
8.5 |
85 |
1 |
0 |
4 |
5 |
1 |
0 |
0 |
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28 |
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1.12 |
1.12 |
28.5 |
0.22 |
-0.24 |
4.3 |
85 |
1 |
0 |
3 |
4 |
1 |
0 |
0 |
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29 |
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1.49 |
2.42 |
18.4 |
-0.39 |
-0.49 |
7.1 |
94 |
1 |
0 |
5 |
2 |
0 |
0 |
0 |
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30 |
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1.18 |
1.20 |
17.5 |
-0.25 |
-0.49 |
4.1 |
95 |
1 |
0 |
3 |
1 |
0 |
0 |
0 |
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31 |
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1.50 |
2.71 |
18.0 |
-0.38 |
-0.44 |
7.9 |
92 |
1 |
0 |
4 |
2 |
0 |
0 |
0 |
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32 |
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1.16 |
1.17 |
18.0 |
-0.25 |
-0.49 |
4.4 |
95 |
1 |
0 |
3 |
1 |
0 |
0 |
0 |
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33 |
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1.50 |
2.50 |
20.8 |
-0.28 |
-0.41 |
7.8 |
93 |
1 |
0 |
4 |
2 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program