 |
PDBsum entry 2gci
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2gci calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2gci
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 pores,
coloured by radius |
|
7 pores,
coloured by radius
|
7 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
4.22 |
5.40 |
27.7 |
-1.92 |
-0.87 |
17.9 |
86 |
|
3 |
4 |
4 |
1 |
0 |
1 |
0 |
|
|
 |
|
2 |
 |
2.08 |
5.05 |
45.4 |
-2.02 |
-0.68 |
17.1 |
85 |
4 |
5 |
5 |
4 |
0 |
3 |
0 |
MRR 1754 D
|
|
3 |
 |
2.08 |
5.05 |
55.7 |
-2.48 |
-0.79 |
21.8 |
85 |
4 |
8 |
5 |
2 |
0 |
2 |
0 |
|
|
4 |
 |
1.56 |
1.60 |
248.3 |
-0.67 |
0.05 |
13.7 |
83 |
7 |
4 |
4 |
7 |
3 |
3 |
0 |
|
|
5 |
 |
1.58 |
1.61 |
262.6 |
-0.97 |
-0.18 |
16.6 |
84 |
10 |
6 |
4 |
11 |
3 |
4 |
0 |
GOL 1306 A GOL 1305 B MRR 1752 B
|
|
6 |
 |
1.53 |
1.56 |
66.5 |
-1.34 |
0.08 |
16.2 |
81 |
3 |
1 |
2 |
3 |
3 |
0 |
0 |
|
 |
7 |
 |
1.19 |
1.19 |
68.3 |
-0.21 |
0.09 |
10.2 |
85 |
4 |
2 |
2 |
13 |
3 |
1 |
0 |
MRR 1751 A GOL 1304 B
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program