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PDBsum entry 2gbt

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 2gbt calculated with MOLE 2.0 PDB id
2gbt
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 2.16 29.7 -1.82 -0.67 23.2 93 2 4 4 1 0 1 0  
2 1.67 2.06 32.3 -1.04 -0.35 20.8 88 3 4 3 3 0 1 0  
3 4.05 4.14 34.2 -2.10 -0.92 25.5 98 2 6 5 0 0 0 0  
4 1.66 2.47 47.7 -1.45 -0.59 22.4 90 4 7 5 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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