PDBsum entry 2g4c

Pore analysis for: 2g4c calculated with

MOLE 2.0

PDB id

2g4c

Pores calculated on whole structure

Pores calculated excluding ligands

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13 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.57

2.67

41.6

-1.63

-0.57

7.7

84

2

1

6

0

2

3

0

2

1.97

2.14

43.4

-2.15

-0.43

19.8

78

5

1

6

3

3

1

0

3

1.32

1.29

50.3

0.17

-0.26

8.3

91

0

4

5

5

1

0

0

4

1.31

1.38

50.6

-0.76

-0.17

22.9

81

8

6

1

4

0

2

1

5

1.53

1.77

58.8

-0.59

-0.16

18.4

85

7

3

3

8

1

1

1

6

1.68

2.07

60.9

-2.36

-0.45

24.7

80

7

2

6

4

2

1

0

7

1.54

1.77

68.1

-0.71

-0.25

16.7

86

9

4

5

8

1

1

1

8

1.32

1.38

68.1

-0.87

-0.27

18.2

89

9

4

5

8

1

1

0

9

1.47

1.60

98.4

-1.14

-0.47

13.9

90

7

6

12

4

0

2

0

10

1.81

2.12

108.5

-2.17

-0.33

20.7

79

10

5

11

4

5

2

0

11

1.54

1.64

136.6

-2.14

-0.51

22.9

84

14

5

11

4

2

1

0

12

1.46

1.26

177.3

-1.20

-0.29

18.3

82

16

6

8

14

4

1

1

13

2.28

2.44

225.8

-2.08

-0.39

20.8

84

20

5

22

8

5

3

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.