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PDBsum entry 2g08

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2g08 calculated with MOLE 2.0 PDB id
2g08
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.25 27.7 -1.01 -0.31 13.5 75 3 3 2 2 3 0 1  MSE 52 B MSE 141 B
2 1.19 1.19 28.7 -1.09 -0.33 15.5 75 3 3 2 2 3 0 1  MSE 52 A MSE 141 A
3 1.38 1.57 29.1 -2.03 -0.38 24.6 74 4 3 2 2 3 1 0  
4 1.18 1.19 41.4 -1.38 -0.44 19.5 79 4 5 3 3 3 1 1  MSE 52 A MSE 141 A
5 1.27 1.29 101.7 -1.21 -0.37 13.2 76 7 4 5 4 5 0 1  MSE 52 B MSE 141 B
6 1.20 1.24 110.3 -1.43 -0.56 16.1 79 7 6 7 4 5 0 1  MSE 52 B MSE 141 B
7 1.31 1.49 136.5 -1.47 -0.50 17.7 79 9 7 8 5 5 0 1  MSE 52 A MSE 141 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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