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PDBsum entry 2fx9

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2fx9 calculated with MOLE 2.0 PDB id
2fx9
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.54 27.0 -1.17 -0.42 19.0 68 3 3 0 1 1 1 0  
2 1.89 1.89 27.0 -1.17 -0.49 14.2 81 1 5 2 2 1 3 0  
3 1.38 1.54 27.6 -2.26 -0.65 34.5 74 4 5 0 1 0 1 0  
4 1.81 1.96 31.2 -1.62 -0.65 21.9 70 3 5 0 1 1 2 0  
5 1.79 1.96 32.5 -1.69 -0.61 22.2 72 4 4 0 1 1 1 0  
6 1.38 1.54 33.2 -1.68 -0.60 23.9 73 2 6 0 2 0 3 0  
7 1.86 2.14 33.5 -1.04 -0.43 14.3 80 2 3 3 2 2 3 0  
8 2.68 2.80 34.2 -1.40 -0.75 12.9 97 3 2 4 2 0 0 0  
9 1.89 1.89 35.4 -1.00 -0.45 11.2 84 2 3 2 3 1 2 0  
10 2.55 2.75 37.4 -1.92 -0.75 25.2 74 2 8 0 2 0 4 0  
11 2.46 2.99 38.7 -1.93 -0.69 24.8 75 3 7 0 2 0 3 0  
12 1.38 1.54 44.3 -2.17 -0.59 28.6 74 4 4 0 2 0 2 0  
13 1.38 1.54 47.4 -1.53 -0.53 21.9 72 4 4 0 2 0 2 0  
14 2.56 2.76 51.6 -1.65 -0.62 22.3 73 4 6 0 2 0 3 0  
15 1.67 2.94 93.9 -1.58 -0.71 15.1 89 5 3 6 1 1 3 0  
16 1.41 1.41 31.4 -1.32 -0.44 10.9 80 4 0 3 0 2 2 0  ORQ 677 Q
17 1.45 1.82 37.7 -1.01 -0.28 9.2 78 3 0 2 2 2 1 1  ORQ 677 P

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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