PDBsum entry 2fud Go to PDB code:  Tunnel analysis for: 2fud calculated with MOLE 2.0 PDB id 2fud Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.45 2.96 22.5 1.16 0.74 7.9 70 3 1 0 1 6 0 0  CRL 999 A CRL 998 B 2 1.36 1.63 24.5 0.63 0.48 7.3 73 2 1 1 1 6 0 0  CRL 999 A 3 1.53 1.53 19.7 -0.61 -0.20 17.2 82 3 2 2 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.