spacer
spacer

PDBsum entry 2fpg

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2fpg calculated with MOLE 2.0 PDB id
2fpg
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.59 2.80 26.1 -2.11 -0.59 19.9 73 2 3 1 0 0 4 0  
2 1.64 1.74 49.1 -2.04 -0.57 22.9 77 3 7 5 3 2 3 0  
3 2.98 3.15 54.6 -2.06 -0.49 24.3 77 4 6 4 4 1 6 0  
4 2.13 2.21 67.1 -1.50 -0.55 12.4 85 5 2 8 4 0 2 0  
5 1.70 2.00 72.2 -1.47 -0.45 15.2 89 6 5 11 4 1 0 0  
6 2.20 2.37 89.5 -1.94 -0.48 23.4 85 9 5 8 5 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer