spacer
spacer

PDBsum entry 2foj

Go to PDB code: 
Top Page protein ligands links
Hydrolase PDB id
2foj
Contents
Protein chain
137 a.a.
Ligands
GLY-ALA-ARG-ALA-
HIS-SER-SER
Waters ×142

References listed in PDB file
Key reference
Title Molecular recognition of p53 and mdm2 by usp7/hausp.
Authors Y.Sheng, V.Saridakis, F.Sarkari, S.Duan, T.Wu, C.H.Arrowsmith, L.Frappier.
Ref. Nat Struct Mol Biol, 2006, 13, 285-291. [DOI no: 10.1038/nsmb1067]
PubMed id 16474402
Abstract
The ubiquitin-specific protease, USP7, has key roles in the p53 pathway whereby it stabilizes both p53 and MDM2. We show that the N-terminal domain of USP7 binds two closely spaced 4-residue sites in both p53 and MDM2, falling between p53 residues 359-367 and MDM2 residues 147-159. Cocrystal structures with USP7 were determined for both p53 peptides and for one MDM2 peptide. These peptides bind the same surface of USP7 as Epstein-Barr nuclear antigen-1, explaining the competitive nature of the interactions. The structures and mutagenesis data indicate a preference for a P/AXXS motif in peptides that bind USP7. Contacts made by serine are identical and crucial for all peptides, and Trp165 in the peptide-binding pocket of USP7 is also crucial. These results help to elucidate the mechanism of substrate recognition by USP7 and the regulation of the p53 pathway.
Figure 1.
Figure 1. Crystal structure of USP7 NTD bound to p53 site 359-PGGS-362. (a) Transparent surface diagrams of p53–USP7. (b) Detailed interactions between USP7 (light gray) and p53 (dark gray). (c) Overlay of p53 (red) and EBNA1 (green) peptides from complex structures. (d) Overlay of p53 (red) and TRANCE-R (yellow) peptides from complex structures, showing conserved interactions with USP7 (purple) and TRAF6 (blue) residues.
Figure 2.
Figure 2. Crystal structure of USP7 NTD bound to p53 site 364-AHSS-367. (a) Transparent surface diagram of USP7 NTD bound by p53 mutant peptide 358-EAGGARAHSS-367 (blue). (b) Detailed interactions between USP7 (light gray) and p53 (dark gray). (c) Overlay of p53 peptides 359-PGGS-362 (red) and 364-AHSS-367 (turquoise) from USP7 complex structures.
Figure 4.
Figure 4. Crystal structure of USP7 NTD bound to MDM2 peptide 4. (a) Transparent surface diagram of MDM2-USP7. (b) Detailed interactions between USP7 (light gray) and MDM2 (dark gray). (c) Overlay of MDM2 (blue) and p53 359-PGGS-362 (red) peptides from USP7 complex structures.
The above figures are reprinted by permission from Macmillan Publishers Ltd: Nat Struct Mol Biol (2006, 13, 285-291) copyright 2006.
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer