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PDBsum entry 2fmt
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Pore analysis for: 2fmt calculated with  MOLE 2.0
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PDB id
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2fmt
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.61 |
1.62 |
29.9 |
-1.27 |
-0.40 |
14.4 |
75 |
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2 |
2 |
1 |
1 |
1 |
1 |
0 |
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C 67 C C 68 C C 69 C G 70 C C 71 C A 72 C A 73 C
C 74 C C 75 C
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2 |
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4.09 |
4.09 |
35.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
U 47 C U 50 C C 51 C C 66 C C 3 D G 4 D G 5 D G 6
D C 17 D C 61 D C 62 D G 63 D G 64 D C 71 D
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3 |
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4.19 |
4.47 |
35.9 |
-1.28 |
-0.81 |
15.2 |
80 |
2 |
2 |
0 |
0 |
0 |
0 |
0 |
C 28 C A 44 C G 45 C A 46 C U 47 C U 50 C C 66 C
C 3 D G 4 D G 5 D G 6 D A 14 D G 15 D C 23 D U 24
D C 71 D
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4 |
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1.52 |
1.84 |
45.2 |
-0.63 |
-0.73 |
6.9 |
79 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 4 D G 5 D G 6 D G 7 D 4SU 8 D G 9 D G 12 D C 13
D G 15 D G 49 D A 59 D U 60 D C 61 D C 62 D G 63
D G 64 D
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5 |
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2.74 |
2.94 |
47.7 |
-1.52 |
-0.43 |
18.5 |
84 |
4 |
4 |
6 |
4 |
1 |
2 |
0 |
U 27 C A 37 C C 67 C C 68 C C 69 C
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6 |
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4.12 |
4.12 |
48.6 |
-1.20 |
-0.80 |
14.2 |
80 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
C 28 C A 44 C G 45 C A 46 C U 47 C G 4 D G 5 D G
6 D A 14 D G 15 D C 17 D C 23 D U 24 D C 61 D C
62 D G 63 D G 64 D
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7 |
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1.69 |
1.89 |
54.9 |
-0.64 |
-0.72 |
7.2 |
79 |
2 |
0 |
0 |
1 |
0 |
0 |
0 |
G 7 D 4SU 8 D G 9 D G 12 D C 13 D G 22 D C 23 D U
24 D C 25 D G 26 D U 27 D C 28 D G 29 D A 37 D C
40 D C 41 D G 42 D A 43 D A 44 D G 45 D A 46 D
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8 |
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1.85 |
1.90 |
72.4 |
-1.26 |
-0.31 |
16.8 |
81 |
5 |
5 |
4 |
6 |
3 |
2 |
0 |
C 67 C C 68 C C 69 C G 70 D A 73 D C 74 D C 75 D
A 76 D FME 586 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program