PDBsum entry 2fhs

Tunnel analysis for: 2fhs calculated with

MOLE 2.0

PDB id

2fhs

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
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visualization
with HETATM:

without HETATM:

8 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.23

1.24

24.7

-0.07

0.19

12.9

77

3

4

1

3

2

2

0

2

1.23

1.24

25.7

-0.18

0.15

13.5

77

3

3

1

3

2

2

0

3

1.23

1.24

30.7

0.06

0.27

9.4

74

1

3

1

4

4

1

0

4

1.23

1.24

31.7

0.11

0.31

8.5

74

1

2

1

4

4

1

0

5

2.04

2.19

16.4

1.01

-0.08

3.3

81

1

1

0

5

1

0

0

6

1.60

1.59

17.2

1.19

0.01

3.2

78

1

1

0

6

1

0

0

7

1.67

1.84

19.7

1.56

0.12

1.5

85

0

0

1

6

1

0

0

8

1.33

1.33

20.6

1.49

0.09

1.6

85

0

0

1

6

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.