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PDBsum entry 2ff6

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2ff6 calculated with MOLE 2.0 PDB id
2ff6
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.36 33.0 -1.33 -0.44 22.2 83 3 3 1 6 0 1 0  CA 700 A ATP 900 A
2 1.22 1.34 35.9 -0.34 -0.29 9.0 82 2 2 3 7 1 0 0  CA 700 A ATP 900 A
3 1.20 1.90 37.8 -1.43 -0.47 24.1 81 4 4 1 5 0 1 0  CA 700 A ATP 900 A
4 1.27 1.36 40.7 -0.50 -0.33 11.5 80 3 3 3 6 1 0 0  CA 700 A ATP 900 A
5 1.21 1.93 42.9 -1.67 -0.42 24.6 82 5 4 2 5 1 1 0  CA 700 A ATP 900 A
6 1.28 1.39 45.8 -0.85 -0.31 13.9 81 4 3 4 6 2 0 0  CA 700 A ATP 900 A
7 1.24 2.05 19.8 -0.43 -0.32 9.6 93 2 1 5 3 0 2 0  
8 1.77 1.86 17.8 1.43 0.49 2.2 73 1 0 0 4 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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