spacer
spacer

PDBsum entry 2fee

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2fee calculated with MOLE 2.0 PDB id
2fee
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.22 2.22 34.8 -1.44 -0.72 15.3 84 2 3 2 0 0 3 0  
2 2.11 2.11 60.1 -0.58 -0.25 13.6 84 5 4 2 4 2 3 0  
3 1.22 2.39 90.9 -0.59 -0.28 15.6 89 7 5 6 9 2 0 0  
4 1.20 2.43 95.2 -0.93 -0.27 17.1 83 4 4 5 13 0 2 1  
5 1.20 1.40 53.8 0.20 -0.14 4.9 81 1 1 3 3 1 3 0  
6 1.85 2.03 34.5 -0.58 -0.01 13.3 78 2 2 2 5 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer