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PDBsum entry 2fea

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Hydrolase PDB id
2fea
Contents
Protein chains
226 a.a.
Ligands
EDO ×10
Metals
_MG ×2
_ZN ×2
Waters ×365

References listed in PDB file
Key reference
Title Crystal structure of mtnx phosphatase from bacillus subtilis at 2.0 angstroms resolution provides a structural basis for bipartite phosphomonoester hydrolysis of 2-Hydroxy-3-Keto-5-Methylthiopentenyl-1-Phosphate.
Authors Q.Xu, K.S.Saikatendu, S.S.Krishna, D.Mcmullan, P.Abdubek, S.Agarwalla, E.Ambing, T.Astakhova, H.L.Axelrod, D.Carlton, H.J.Chiu, T.Clayton, M.Didonato, L.Duan, M.A.Elsliger, J.Feuerhelm, S.K.Grzechnik, J.Hale, E.Hampton, G.W.Han, J.Haugen, L.Jaroszewski, K.K.Jin, H.E.Klock, M.W.Knuth, E.Koesema, M.D.Miller, A.T.Morse, E.Nigoghossian, L.Okach, S.Oommachen, J.Paulsen, R.Reyes, C.L.Rife, R.Schwarzenbacher, H.Van den bedem, A.White, G.Wolf, K.O.Hodgson, J.Wooley, A.M.Deacon, A.Godzik, S.A.Lesley, I.A.Wilson.
Ref. Proteins, 2007, 69, 433-439. [DOI no: 10.1002/prot.21602]
PubMed id 17654724
Abstract
No abstract given.
Figure 1.
Figure 1. Crystal structure of bsmtnX: (A) A simplified schematic of the methionine salvage pathway in B. subtilis according to the schema proposed by Sekowska et al.[2] (B) Stereo ribbon diagram of the bsmtnX monomer color-coded from N-terminus (blue) to C-terminus (red). Helices (H1-H12) and -strands 1- 7) are labeled. (C) Diagram showing the secondary structural elements in bsmtnX superimposed on its primary sequence. The helices, -strands, -turns, and -turns are indicated. The -hairpin is depicted as a red loop. (D) Grasp figure showing distribution of surface electrostatic potential (red-negative (-6kT), blue-positive (+6kT), and white-neutral, where k is the Boltzmann constant and T is the temperature) for bsmtnX positioned in an orientation similar to that in (B). The bound Mg^2+ ion is shown as a green sphere and the position of the buried Zn^2+ ion is indicated by a shaded sphere.
Figure 2.
Figure 2. (A) Structural superposition of bsmtnX (green), mjPSP (PDB: 1l7p; yellow), and paThrH (PDB: 1rku; grey). The active site aspartate, the bound phosphoserine in mjPSP, and the metal ions are shown in ball-and-stick representation. The zinc-binding sub-domain unique to bsmtnX is colored red and an arrow indicates its position. The loop connecting helices H2 and H3, which modulates transition between open/closed states, is also colored red. (B) Structural superposition of the active site residues of the three enzymes. Carbon atoms are colored as in (A), oxygens are red, nitrogens are blue, and phosphate is orange.
The above figures are reprinted by permission from John Wiley & Sons, Inc.: Proteins (2007, 69, 433-439) copyright 2007.
PROCHECK
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 Headers

 

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