PDBsum entry 2fdh Go to PDB code:  Tunnel analysis for: 2fdh calculated with MOLE 2.0 PDB id 2fdh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.05 1.39 18.8 -0.52 -0.10 10.2 59 2 0 1 2 4 0 0   2 1.08 1.35 32.9 0.44 0.40 10.8 77 2 2 2 4 4 0 0   3 1.58 1.87 36.9 -1.33 0.17 20.6 71 4 2 2 3 6 0 0  AKG 400 A DT 501 B MA7 502 B 4 1.21 1.51 15.6 -1.47 0.00 17.4 74 2 0 2 1 1 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.