spacer
spacer

PDBsum entry 2fc2

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 2fc2 calculated with MOLE 2.0 PDB id
2fc2
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.85 2.04 81.8 -1.86 -0.29 27.8 73 10 5 2 2 3 0 2  HEM 901 A HBI 903 A HAR 909 A NO 1901 A
2 1.80 1.80 168.1 -1.80 -0.28 25.1 77 13 5 3 5 4 0 1  HEM 901 A HBI 903 A HAR 909 A NO 1901 A
3 1.32 1.69 35.6 -0.72 -0.37 12.0 83 4 1 2 4 0 2 0  
4 1.44 1.73 56.9 -2.18 -0.47 25.6 74 7 7 2 1 2 2 1  HBI 904 B
5 1.52 1.77 63.4 -1.84 -0.14 22.8 71 8 5 3 2 5 2 1  HAR 910 A HEM 902 B HBI 904 B NO 1902 B NO 2903 B
6 1.72 2.61 68.3 -1.65 -0.17 23.0 71 9 6 3 2 6 2 2  HAR 910 A HEM 902 B HBI 904 B NO 1902 B NO 2903 B
7 1.26 2.79 114.4 -1.74 -0.18 24.4 81 12 7 5 6 3 1 1  HAR 910 A HEM 902 B HBI 904 B NO 1902 B
8 1.29 2.70 119.4 -1.68 -0.22 24.7 80 13 8 5 6 3 1 2  HAR 910 A HEM 902 B HBI 904 B NO 1902 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer