PDBsum entry 2f5o Go to PDB code:  Tunnel analysis for: 2f5o calculated with MOLE 2.0 PDB id 2f5o Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.49 21.7 -0.35 -0.41 10.9 73 3 0 0 1 0 0 0  DA 5 B DG 6 B DG 8 C DA 9 C DT 10 C 2 1.34 1.35 24.3 -0.78 -0.47 14.1 76 2 0 0 2 0 0 0  DA 7 B DC 6 C DG 8 C DA 9 C 3 1.35 1.36 31.3 -0.98 -0.41 19.1 80 3 2 0 1 0 0 0  DT 4 B DA 5 B DG 6 B DG 8 C DA 9 C DT 10 C DC 11 C DT 12 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.