PDBsum entry 2f5k Go to PDB code:  Tunnel analysis for: 2f5k calculated with MOLE 2.0 PDB id 2f5k Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.40 30.6 -1.36 -0.18 22.7 78 5 1 2 5 1 0 0   2 1.38 1.39 34.9 -1.65 -0.36 20.4 78 4 2 4 4 1 2 0   3 1.38 1.39 40.9 -1.36 -0.42 16.4 78 5 4 6 5 1 1 0   4 1.39 1.39 49.6 -1.28 -0.36 16.4 75 6 3 6 5 2 1 0   5 1.24 1.24 16.1 -1.66 -0.43 18.8 80 2 3 1 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.