spacer
spacer

PDBsum entry 2f1x

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 2f1x calculated with MOLE 2.0 PDB id
2f1x
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.88 15.5 -0.23 0.03 5.9 71 1 0 2 3 2 1 1  
2 1.33 1.74 16.3 -1.36 0.09 31.1 67 4 2 0 1 2 0 0  
3 1.14 1.14 18.6 -0.84 -0.44 11.6 80 4 0 2 0 2 1 0  
4 1.33 1.76 23.6 -0.45 -0.11 18.8 76 4 2 1 1 2 0 0  
5 1.12 1.12 26.2 -0.54 -0.35 9.7 72 4 0 2 3 3 1 1  
6 1.32 1.74 35.5 -1.64 -0.49 12.4 82 1 2 6 2 2 1 0  
7 1.28 1.44 39.3 -1.02 -0.40 12.2 80 2 1 4 2 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer