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PDBsum entry 2f16

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2f16 calculated with MOLE 2.0 PDB id
2f16
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.08 2.11 31.9 -1.82 -0.52 15.9 88 2 1 6 3 1 0 0  
2 1.91 2.01 55.8 -1.40 -0.30 22.9 81 8 7 2 4 3 1 0  
3 1.80 2.01 111.1 -2.47 -0.41 27.5 80 15 11 10 5 7 1 0  
4 1.19 1.89 112.5 -1.95 -0.58 24.0 86 10 14 12 8 4 4 0  BO2 1402 K
5 1.44 1.94 115.7 -1.97 -0.32 23.6 80 17 9 9 5 8 2 0  
6 1.27 1.44 122.3 -1.20 -0.24 14.9 82 8 10 13 9 10 4 0  BO2 1405 2 BO2 1402 K BO2 1401 V
7 1.81 1.84 132.4 -2.20 -0.39 26.9 81 18 11 9 7 6 3 0  
8 1.44 1.93 142.0 -1.59 -0.23 20.2 81 18 10 10 9 7 3 0  
9 1.57 2.25 141.7 -2.17 -0.36 27.5 78 22 14 6 6 7 2 0  
10 2.01 2.26 143.7 -2.41 -0.58 28.9 83 18 11 8 3 3 2 0  
11 2.06 3.40 146.5 -2.27 -0.56 26.9 83 16 11 10 4 3 2 0  
12 1.25 1.26 150.6 -0.83 -0.02 12.9 79 13 7 14 14 12 5 0  
13 1.79 1.83 148.5 -2.35 -0.46 27.8 80 20 16 9 7 5 2 0  
14 2.03 4.65 163.0 -2.35 -0.50 28.7 80 21 17 8 5 6 1 0  
15 1.40 5.24 166.3 -2.32 -0.40 30.2 80 23 17 7 7 7 1 0  
16 1.72 1.92 180.4 -1.65 -0.32 18.3 84 18 9 15 9 7 3 1  BO2 1401 V
17 1.55 1.97 182.5 -2.34 -0.34 24.6 80 21 10 13 7 9 2 0  
18 1.32 1.40 197.4 -1.35 -0.16 18.4 78 20 10 14 14 16 4 0  
19 1.60 1.83 208.7 -1.73 -0.36 20.2 85 19 8 16 10 8 2 1  BO2 1401 V
20 1.73 1.89 210.7 -2.29 -0.40 25.3 81 22 9 14 8 10 1 0  
21 1.92 2.67 218.7 -1.99 -0.37 21.4 84 21 8 19 9 9 3 1  BO2 1401 V
22 1.92 1.91 223.4 -1.89 -0.43 21.1 84 20 12 17 7 9 2 1  BO2 1401 V
23 1.50 1.98 235.5 -2.16 -0.38 24.4 81 27 14 14 8 8 2 0  
24 1.94 3.17 236.7 -2.58 -0.46 28.8 80 28 15 13 7 9 2 0  
25 1.54 4.93 248.6 -2.35 -0.35 25.9 80 27 11 18 10 13 1 0  
26 1.02 1.67 251.9 -1.55 -0.29 20.6 80 27 14 16 15 12 3 0  
27 1.90 2.19 249.0 -2.51 -0.43 25.7 81 28 9 19 9 11 2 0  
28 1.65 4.11 250.6 -2.63 -0.48 29.5 80 29 20 12 6 8 1 0  
29 1.02 1.66 294.7 -1.22 -0.22 14.9 83 22 8 24 17 14 4 1  BO2 1401 V
30 1.02 1.67 296.7 -1.62 -0.24 18.6 80 25 9 22 15 16 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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