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PDBsum entry 2f0x

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Pore analysis for: 2f0x calculated with MOLE 2.0 PDB id
2f0x
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.33 2.33 25.1 -0.61 -0.21 9.6 85 3 2 3 4 1 1 0  SO4 1007 B MSE 91 C SO4 1020 C
2 1.50 1.53 37.3 1.05 0.11 5.5 83 0 1 2 8 0 1 1  MSE 4 H MSE 15 H
3 1.40 2.05 42.2 -1.12 -0.37 16.4 79 5 2 2 4 2 0 0  MSE 91 A MSE 91 C
4 1.18 1.29 42.1 -0.97 -0.40 12.9 83 4 1 3 4 0 1 1  MSE 4 A
5 1.38 2.39 42.4 -1.60 -0.51 12.7 83 6 2 6 3 1 1 0  MSE 91 B SO4 1012 C
6 1.10 1.10 46.6 -1.21 -0.37 10.6 92 4 3 9 5 1 0 0  MSE 86 C SO4 1020 C MSE 86 D
7 1.17 1.17 49.3 -1.77 -0.74 20.8 82 3 3 0 0 0 0 0  MSE 15 E SO4 1017 E
8 1.19 1.28 49.7 -2.45 -0.57 33.1 83 7 3 0 2 0 0 0  MSE 42 C SO4 1016 D
9 2.03 2.17 52.8 -0.64 -0.26 9.8 89 4 1 6 7 1 1 0  MSE 91 A SO4 1008 B SO4 1015 D
10 1.50 2.55 60.8 -1.34 -0.42 14.1 80 6 4 4 5 2 1 0  MSE 91 B MSE 91 C SO4 1012 C
11 1.17 1.53 61.4 -0.64 -0.22 11.9 84 5 4 5 8 2 1 0  MSE 91 B MSE 86 C SO4 1012 C SO4 1020 C MSE 86 D
12 1.56 1.54 68.0 -0.98 -0.28 16.6 86 7 3 4 9 1 1 0  SO4 1014 F MSE 15 H SO4 1004 H
13 1.19 1.19 70.1 -0.60 -0.26 10.9 87 5 4 6 12 2 0 0  MSE 91 F MSE 15 G MSE 86 G SO4 1006 G
14 1.48 1.52 73.9 -0.76 -0.22 15.2 82 7 3 4 8 1 2 1  SO4 1014 F MSE 4 H SO4 1004 H
15 1.17 1.24 86.5 -0.27 -0.10 11.1 90 5 4 6 16 2 0 0  MSE 15 G MSE 86 G SO4 1006 G MSE 15 H MSE 86 H S
O4 1004 H
16 1.17 1.18 103.1 -0.59 -0.16 13.4 87 10 4 5 13 2 1 0  SO4 1014 F MSE 15 G MSE 86 G SO4 1006 G MSE 86 H
SO4 1004 H
17 1.15 1.14 121.3 0.16 -0.10 10.6 86 6 3 3 15 0 3 1  MSE 4 A SO4 1012 C MSE 15 F
18 1.23 1.23 127.5 -0.87 -0.38 15.6 82 10 4 2 7 0 2 1  SO4 1011 A MSE 15 C MSE 42 C MSE 4 F
19 1.20 1.20 156.1 -1.17 -0.42 18.9 82 13 6 2 7 0 2 1  SO4 1011 A MSE 15 C MSE 42 D SO4 1016 D MSE 4 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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