 |
PDBsum entry 2exj
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2exj calculated with MOLE 2.0
|
PDB id
|
|
|
|
2exj
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
5 pores,
coloured by radius |
 |
6 pores,
coloured by radius
|
6 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.15 |
2.31 |
64.1 |
-2.00 |
-0.21 |
25.4 |
77 |
 |
7 |
3 |
4 |
2 |
3 |
1 |
0 |
 |
|
 |
 |
2 |
 |
1.46 |
3.09 |
71.0 |
-1.23 |
-0.32 |
7.5 |
81 |
1 |
2 |
10 |
3 |
4 |
2 |
0 |
GOL 2016 A GOL 2019 D
|
 |
3 |
 |
1.46 |
3.09 |
76.5 |
-1.23 |
-0.35 |
9.6 |
84 |
3 |
2 |
8 |
5 |
3 |
3 |
0 |
GOL 2016 A
|
 |
4 |
 |
2.41 |
2.46 |
88.5 |
-2.40 |
-0.64 |
32.1 |
86 |
9 |
9 |
1 |
3 |
0 |
2 |
0 |
|
 |
5 |
 |
2.16 |
2.33 |
112.3 |
-2.27 |
-0.49 |
24.6 |
77 |
11 |
6 |
4 |
3 |
4 |
3 |
0 |
|
 |
6 |
 |
1.54 |
1.77 |
143.2 |
-1.83 |
-0.31 |
26.8 |
79 |
14 |
10 |
5 |
5 |
5 |
3 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |