PDBsum entry 2eb5 Go to PDB code:  Pore analysis for: 2eb5 calculated with MOLE 2.0 PDB id 2eb5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.52 2.08 29.6 -0.28 -0.07 14.0 85 2 2 2 4 2 0 0   2 1.80 1.84 33.0 -0.91 -0.47 8.8 87 3 0 4 2 0 1 0   3 1.78 1.79 34.4 -0.62 0.05 14.2 78 2 2 2 3 3 0 0   4 1.80 1.84 39.1 -1.55 -0.26 15.9 87 4 1 5 2 1 1 0   5 1.50 1.50 44.1 -1.19 -0.09 16.0 89 3 3 4 4 1 0 0   6 1.80 1.86 48.6 -1.17 -0.30 14.4 80 4 2 4 4 1 2 0  OXL 2004 D 7 1.15 1.15 48.9 -1.02 -0.46 14.0 92 4 1 6 4 0 0 0  OXL 2005 E 8 1.67 1.82 52.3 -1.30 -0.36 17.5 85 5 2 3 5 0 1 0   9 1.51 1.51 69.0 -1.53 -0.29 16.7 87 6 3 6 4 1 1 0   10 2.14 2.40 108.7 -1.77 -0.32 21.6 83 4 7 7 5 2 0 0   11 2.23 2.22 129.0 -1.65 -0.26 20.0 81 5 7 8 6 4 1 0   12 1.90 2.42 28.8 -0.39 -0.11 11.8 91 1 1 3 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.