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PDBsum entry 2e8q

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2e8q calculated with MOLE 2.0 PDB id
2e8q
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.24 30.2 -0.23 -0.21 8.0 81 2 0 0 3 3 1 0  
2 1.25 1.42 25.1 0.03 -0.05 6.6 84 2 1 1 5 2 1 0  SAH 301 A
3 1.47 1.48 25.8 -0.57 -0.18 13.3 79 3 2 1 6 1 2 0  
4 1.32 1.49 23.0 -1.27 -0.34 17.2 81 2 2 1 3 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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