PDBsum entry 2e7r

Tunnel analysis for: 2e7r calculated with

MOLE 2.0

PDB id

2e7r

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

5 tunnels, coloured by tunnel radius

5 tunnels, coloured by tunnel radius

5 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.60

1.66

19.5

1.06

0.21

4.9

87

1

1

1

5

1

1

0

2

1.57

1.59

20.4

0.86

0.16

4.1

91

1

1

1

4

1

1

0

3

1.52

1.57

35.4

1.08

0.24

2.7

89

2

0

2

8

2

1

0

SO4 1307 B SO4 1311 B

4

1.65

1.67

37.4

0.76

0.01

2.7

89

2

0

3

6

2

1

0

SO4 1307 B SO4 1311 B

5

1.35

1.35

22.1

-1.16

-0.32

16.5

76

2

2

1

2

1

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.