spacer
spacer

PDBsum entry 2e5e

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 2e5e calculated with MOLE 2.0 PDB id
2e5e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 1.81 15.8 2.04 1.02 1.0 53 0 0 0 5 3 0 2  
2 1.15 1.86 17.2 -0.07 0.07 3.8 63 1 0 1 0 3 0 2  
3 1.37 1.41 28.4 1.05 0.33 1.7 57 0 0 0 5 3 2 2  
4 1.39 1.42 29.4 1.59 0.65 2.3 55 1 0 0 5 3 0 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer