spacer
spacer

PDBsum entry 2e4x

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2e4x calculated with MOLE 2.0 PDB id
2e4x
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.48 15.2 2.08 0.73 6.5 89 1 1 0 5 1 0 0  
2 1.30 1.98 15.5 -0.08 0.55 4.2 61 1 1 1 1 2 1 1  
3 1.37 2.94 17.8 -0.06 0.49 9.4 66 2 1 1 2 2 1 0  
4 1.40 2.20 16.1 -0.31 0.24 7.6 70 1 2 1 2 3 0 0  
5 1.30 1.30 15.1 -1.89 -0.49 6.8 73 0 1 3 0 2 1 0  
6 1.16 1.98 15.5 0.01 0.11 9.4 75 2 0 1 6 0 1 0  
7 1.15 1.99 26.7 -0.19 -0.01 9.7 74 2 0 1 6 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer