PDBsum entry 2e16

Tunnel analysis for: 2e16 calculated with

MOLE 2.0

PDB id

2e16

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

3 tunnels, coloured by tunnel radius

5 tunnels, coloured by tunnel radius

5 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.15

1.18

22.3

0.00

-0.12

5.3

81

1

0

1

4

2

2

0

SAH 1300 A

2

1.67

1.67

25.2

0.24

-0.09

6.8

87

2

1

1

6

2

1

0

SAH 1300 A SO4 1303 A SO4 1301 B

3

1.49

1.54

20.2

1.45

0.33

2.1

89

1

0

1

5

1

1

0

4

1.20

1.34

23.8

0.24

0.09

4.4

81

1

0

1

5

1

2

0

5

1.30

1.30

22.6

-1.18

-0.29

15.7

76

2

2

1

2

1

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.