PDBsum entry 2dv5 Go to PDB code:  Tunnel analysis for: 2dv5 calculated with MOLE 2.0 PDB id 2dv5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 1.66 20.6 0.63 0.01 5.5 87 1 1 1 5 1 1 0  SAH 1300 A SO4 1303 A 2 1.16 1.25 22.1 0.06 -0.17 3.7 78 1 0 1 5 2 2 0  SAH 1300 A 3 1.29 1.29 22.5 -1.11 -0.32 16.0 78 2 2 1 3 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.