PDBsum entry 2dv2 Go to PDB code:  Pore analysis for: 2dv2 calculated with MOLE 2.0 PDB id 2dv2 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   23 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.27 36.3 0.17 -0.18 9.3 85 2 3 2 10 0 1 0  TRS 2001 B 2 1.42 1.63 39.7 -1.15 -0.55 12.9 81 3 3 2 4 2 2 0   3 1.34 1.65 44.9 -0.82 -0.15 15.9 87 4 3 2 9 1 1 0  TRS 2001 B 4 2.51 2.63 47.5 -0.05 -0.34 10.7 85 2 3 1 6 0 1 0   5 1.62 2.46 50.6 -1.22 -0.18 22.5 80 7 5 1 5 2 0 0   6 1.25 1.26 55.4 -0.17 -0.08 13.2 87 4 3 2 9 1 1 0   7 1.38 1.62 68.7 -0.77 -0.13 15.2 86 6 4 3 6 1 1 0   8 1.41 1.60 75.5 -1.13 -0.20 20.6 89 7 7 6 10 2 1 0  TRS 2001 B 9 1.30 1.39 86.0 -0.79 -0.19 12.5 82 4 4 4 13 3 2 0  TRS 2001 B 10 1.36 1.66 91.8 -1.45 -0.29 21.7 89 8 6 7 7 2 1 0   11 1.17 1.37 93.0 -1.22 -0.27 14.5 84 8 7 5 7 3 1 0   12 1.30 1.37 94.8 -1.09 -0.26 14.4 82 6 6 5 13 3 3 0  TRS 2001 B 13 1.72 2.86 95.2 -1.07 -0.17 19.7 89 7 6 7 15 2 2 0  TRS 2001 B 14 1.20 1.39 100.9 -0.65 -0.08 11.0 81 7 5 4 12 4 2 0   15 1.19 1.25 104.4 -0.55 -0.21 11.4 83 5 6 5 12 3 2 0   16 1.20 1.40 105.2 -0.26 -0.06 8.6 79 3 3 4 16 4 3 0   17 1.21 1.38 117.5 -1.50 -0.36 18.9 87 10 9 9 8 4 1 0   18 1.19 1.24 125.3 -0.97 -0.17 15.2 84 9 7 8 13 5 2 0   19 1.23 1.37 144.1 -2.13 -0.56 20.2 81 12 7 7 7 2 4 0   20 1.48 1.70 151.7 -1.63 -0.55 17.0 83 8 6 7 8 3 2 0   21 1.36 1.58 227.0 -1.91 -0.56 18.1 82 16 10 12 10 5 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.