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PDBsum entry 2dtv

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protein ligands Protein-protein interface(s) links
Transferase PDB id
2dtv

 

 

 

 

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Contents
Protein chains
(+ 0 more) 391 a.a. *
Ligands
PLP ×6
LEU ×3
Waters ×195
* Residue conservation analysis
Obsolete entry
PDB id:
2dtv
Name: Transferase
Title: Crystal structure of lysn, alpha-aminoadipate aminotransferase, from thermus thermophilus hb27
Structure: Alpha-aminodipate aminotransferase. Chain: a, b, c, d, e, f. Engineered: yes
Source: Thermus thermophilus. Bacteria. Strain: hb27. Gene: lysn. Expressed in: escherichia coli.
Resolution:
2.26Å     R-factor:   0.220     R-free:   0.269
Authors: T.Tomita,T.Miyazaki,T.Miyagawa,S.Fushinobu,T.Kuzuyama, M.Nishiyama
Key ref: T.Tomita et al. Crystal structure of alpha-Aminoadipate aminotransferase, A homolog of human kynurenine aminotransferase ii, From thermus thermophilus. To be published, .
Date:
17-Jul-06     Release date:   17-Jul-07    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q72LL6  (LYSN_THET2) -  2-aminoadipate transaminase from Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)
Seq:
Struc:
397 a.a.
391 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.6.1.39  - 2-aminoadipate transaminase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Lysine catabolism
      Reaction: L-2-aminoadipate + 2-oxoglutarate = 2-oxoadipate + L-glutamate
L-2-aminoadipate
+ 2-oxoglutarate
= 2-oxoadipate
+
L-glutamate
Bound ligand (Het Group name = LEU)
matches with 72.73% similarity
      Cofactor: Pyridoxal 5'-phosphate
Pyridoxal 5'-phosphate
Bound ligand (Het Group name = PLP) matches with 93.75% similarity
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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