PDBsum entry 2dss Go to PDB code:  Tunnel analysis for: 2dss calculated with MOLE 2.0 PDB id 2dss Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.53 20.2 -0.26 -0.08 5.4 83 0 1 3 3 4 0 0   2 1.45 1.64 21.7 0.60 0.19 2.3 78 0 1 4 3 5 0 0   3 1.31 1.45 29.8 -1.06 -0.04 11.0 82 3 1 4 2 4 0 0   4 1.32 1.39 31.3 -0.24 0.16 7.8 77 3 1 4 2 5 0 0   5 1.20 1.56 46.0 1.01 0.48 4.6 82 1 1 5 7 6 0 0  DRG 291 6 1.22 2.22 47.5 1.36 0.52 2.8 79 1 0 6 7 7 0 0  DRG 291 7 1.15 1.45 31.0 0.92 0.27 4.4 81 2 0 5 9 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.