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PDBsum entry 2dr2
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Pore analysis for: 2dr2 calculated with MOLE 2.0
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PDB id
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2dr2
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.75 |
1.75 |
42.8 |
-1.45 |
-0.67 |
10.0 |
86 |
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2 |
0 |
2 |
0 |
0 |
1 |
0 |
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G 10 B C 11 B U 27 B C 28 B U 29 B G 30 B A 31 B C 32 B U 33 B A 36 B G 37 B U 39 B
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2 |
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2.08 |
2.08 |
48.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
U 5 B C 6 B G 7 B G 9 B C 11 B A 15 B G 46 B U 47 B U 48 B G 49 B C 50 B G 51 B U 52 B G 53 B G 57 B A 59 B U 60 B C 61 B A 62 B G 64 B
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3 |
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1.60 |
1.60 |
54.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
U 20 B A 21 B G 22 B C 23 B G 24 B G 26 B C 28 B U 29 B G 30 B A 31 B C 32 B U 33 B A 36 B G 37 B A 38 B U 39 B C 40 B A 41 B G 42 B A 43 B A 44 B
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4 |
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1.64 |
1.90 |
59.3 |
-0.82 |
-0.19 |
16.0 |
85 |
2 |
3 |
1 |
3 |
2 |
0 |
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G 10 B C 11 B G 24 B C 25 B G 26 B
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5 |
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1.60 |
1.60 |
79.0 |
-0.51 |
-0.25 |
9.5 |
85 |
2 |
3 |
1 |
3 |
2 |
0 |
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G 24 B C 25 B G 26 B C 28 B U 29 B G 30 B A 31 B C 32 B U 33 B A 36 B G 37 B A 38 B U 39 B C 40 B
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6 |
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1.65 |
1.91 |
88.8 |
-0.42 |
-0.33 |
7.9 |
85 |
2 |
2 |
1 |
3 |
2 |
0 |
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U 20 B A 21 B G 22 B C 23 B G 24 B C 25 B G 26 B A 38 B U 39 B C 40 B A 41 B G 42 B A 43 B A 44 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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