PDBsum entry 2dqf Go to PDB code:  Pore analysis for: 2dqf calculated with MOLE 2.0 PDB id 2dqf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.41 2.96 31.9 -0.80 -0.51 4.8 97 3 0 8 5 0 2 0   2 1.98 1.98 37.4 -1.27 -0.63 13.8 96 5 2 8 5 0 1 0   3 1.18 1.84 48.1 -1.04 -0.46 11.3 92 5 1 11 6 1 1 0   4 1.15 1.84 48.7 -1.18 -0.50 11.6 92 5 1 11 4 1 1 0   5 1.13 1.84 55.3 -1.63 -0.62 17.5 89 5 4 8 2 1 1 0   6 1.44 1.44 55.9 -1.40 -0.66 10.7 95 4 4 13 4 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.