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PDBsum entry 2dp7

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Top Page dna_rna ligands metals tunnels links
Tunnel analysis for: 2dp7 calculated with MOLE 2.0 PDB id
2dp7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.20 5.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  6 DA A,7 DT A,8 DU A,20 DU B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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