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PDBsum entry 2dns
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Pore analysis for: 2dns calculated with  MOLE 2.0
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PDB id
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2dns
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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20 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
1.56 |
25.4 |
0.33 |
-0.03 |
12.2 |
79 |
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1 |
3 |
1 |
3 |
3 |
0 |
0 |
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2 |
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3.20 |
4.22 |
25.4 |
-1.64 |
-0.36 |
18.6 |
85 |
1 |
3 |
3 |
2 |
1 |
1 |
0 |
BA 3004 A
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3 |
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2.07 |
2.07 |
27.9 |
-1.48 |
-0.44 |
8.7 |
80 |
3 |
0 |
5 |
1 |
3 |
1 |
0 |
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4 |
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1.41 |
2.45 |
33.9 |
0.22 |
-0.02 |
12.5 |
83 |
1 |
3 |
1 |
4 |
2 |
1 |
0 |
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5 |
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2.48 |
3.75 |
46.5 |
-2.76 |
-0.75 |
33.5 |
81 |
7 |
7 |
2 |
0 |
0 |
0 |
0 |
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6 |
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2.01 |
2.13 |
49.9 |
-2.16 |
-0.12 |
24.2 |
72 |
8 |
7 |
1 |
0 |
3 |
1 |
0 |
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7 |
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1.99 |
2.00 |
58.2 |
-1.44 |
-0.39 |
11.7 |
83 |
4 |
3 |
7 |
3 |
4 |
2 |
0 |
BA 3004 A
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8 |
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2.19 |
2.87 |
61.4 |
-2.00 |
-0.53 |
29.6 |
84 |
9 |
8 |
5 |
5 |
0 |
3 |
0 |
BA 3007 A BA 3020 A BA 3019 B BA 3008 F
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9 |
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2.85 |
4.09 |
66.1 |
-1.97 |
-0.75 |
23.3 |
87 |
5 |
6 |
3 |
2 |
0 |
1 |
0 |
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10 |
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1.87 |
2.96 |
66.7 |
-2.22 |
-0.42 |
29.9 |
80 |
13 |
13 |
2 |
4 |
0 |
3 |
0 |
BA 3009 C BA 3011 C BA 3013 D BA 3010 E
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11 |
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1.49 |
1.67 |
68.9 |
-2.42 |
-0.61 |
27.7 |
83 |
11 |
7 |
4 |
1 |
2 |
0 |
0 |
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12 |
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1.86 |
2.95 |
70.5 |
-1.95 |
-0.14 |
27.0 |
74 |
9 |
11 |
1 |
4 |
3 |
3 |
0 |
BA 3009 C BA 3011 C BA 3013 D BA 3010 E
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13 |
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2.51 |
3.20 |
71.8 |
-2.80 |
-0.70 |
33.6 |
81 |
11 |
7 |
3 |
0 |
0 |
1 |
0 |
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14 |
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2.17 |
2.65 |
80.7 |
-2.24 |
-0.78 |
24.9 |
86 |
8 |
8 |
4 |
1 |
0 |
0 |
0 |
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15 |
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2.51 |
3.20 |
90.2 |
-2.86 |
-0.68 |
34.2 |
81 |
11 |
9 |
3 |
0 |
0 |
1 |
0 |
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16 |
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2.19 |
2.77 |
94.9 |
-2.22 |
-0.38 |
30.6 |
75 |
13 |
9 |
4 |
4 |
3 |
4 |
1 |
BA 3009 C BA 3011 C BA 3012 D BA 3010 E
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17 |
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1.94 |
3.60 |
105.8 |
-2.29 |
-0.51 |
30.2 |
80 |
18 |
13 |
5 |
4 |
0 |
4 |
1 |
BA 3009 C BA 3011 C BA 3012 D BA 3010 E
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18 |
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2.30 |
2.65 |
109.6 |
-2.24 |
-0.78 |
25.8 |
84 |
12 |
10 |
5 |
1 |
0 |
1 |
0 |
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19 |
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1.52 |
1.69 |
112.6 |
-2.56 |
-0.59 |
29.4 |
82 |
15 |
9 |
5 |
1 |
2 |
1 |
0 |
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20 |
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2.51 |
3.21 |
131.0 |
-2.55 |
-0.69 |
28.8 |
79 |
13 |
11 |
3 |
0 |
0 |
2 |
1 |
BA 3017 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program