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PDBsum entry 2dg1
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Tunnel analysis for: 2dg1 calculated with  MOLE 2.0
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PDB id
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2dg1
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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10 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.54 |
1.74 |
18.5 |
-1.21 |
-0.48 |
13.1 |
85 |
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2 |
1 |
3 |
1 |
3 |
0 |
0 |
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2 |
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1.52 |
2.08 |
16.9 |
-1.26 |
-0.50 |
13.7 |
87 |
2 |
2 |
3 |
1 |
2 |
0 |
0 |
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3 |
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1.52 |
2.11 |
18.4 |
-1.24 |
-0.54 |
13.2 |
85 |
2 |
1 |
3 |
1 |
3 |
0 |
0 |
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4 |
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1.24 |
1.47 |
22.9 |
-0.32 |
-0.22 |
13.3 |
86 |
2 |
2 |
3 |
3 |
0 |
0 |
1 |
GOL 5002 B
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5 |
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1.24 |
1.44 |
24.6 |
-0.36 |
-0.38 |
6.3 |
74 |
1 |
1 |
3 |
1 |
2 |
1 |
1 |
GOL 5002 B
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6 |
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1.26 |
1.47 |
21.5 |
-0.57 |
-0.29 |
15.8 |
85 |
2 |
2 |
2 |
2 |
0 |
0 |
1 |
GOL 5004 D
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7 |
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1.24 |
1.24 |
26.1 |
-0.58 |
-0.49 |
6.9 |
78 |
2 |
1 |
3 |
1 |
1 |
0 |
1 |
GOL 5004 D
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8 |
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1.55 |
1.55 |
17.8 |
0.76 |
-0.14 |
5.3 |
97 |
0 |
2 |
2 |
3 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program