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PDBsum entry 2dfc

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Tunnel analysis for: 2dfc calculated with MOLE 2.0 PDB id
2dfc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 3.18 18.3 -1.40 -0.06 17.2 74 1 2 3 2 4 1 0  
2 1.24 3.20 21.9 -0.88 0.30 12.3 70 0 2 1 3 6 1 0  
3 1.24 3.19 23.6 -1.85 -0.01 21.2 73 1 2 2 2 5 0 0  
4 1.24 3.19 25.5 -1.89 -0.13 19.0 74 1 2 2 2 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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