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PDBsum entry 2dev

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2dev calculated with MOLE 2.0 PDB id
2dev
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 5.27 15.3 -2.64 -0.46 39.8 77 3 3 1 2 1 0 0  
2 1.36 1.36 17.2 -2.03 -0.29 19.8 80 4 1 1 2 2 0 0  
3 1.37 1.37 35.7 -2.14 -0.35 22.6 80 5 2 2 2 2 0 0  
4 1.16 1.84 19.4 1.07 0.12 6.9 80 1 0 1 9 0 0 0  
5 1.16 1.71 20.6 1.23 0.29 11.0 79 2 2 0 8 0 0 0  
6 1.15 1.86 20.6 1.37 0.38 9.5 78 2 0 0 8 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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