PDBsum entry 2ddu Go to PDB code:  Pore analysis for: 2ddu calculated with MOLE 2.0 PDB id 2ddu Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.22 2.54 32.1 -0.81 -0.44 15.5 84 5 2 4 7 1 4 0   2 1.95 2.06 41.3 -0.82 -0.50 12.1 81 6 5 4 5 3 4 2   3 1.66 2.67 46.5 -1.35 -0.37 22.9 81 6 5 2 7 3 4 0   4 1.67 2.58 55.8 -1.22 -0.42 18.6 77 7 8 2 6 5 4 2   5 1.08 1.08 69.9 -1.23 -0.55 16.7 81 7 7 6 9 4 4 0  MG 3 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.