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PDBsum entry 2dds

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 2dds calculated with MOLE 2.0 PDB id
2dds
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.00 2.01 27.2 -2.30 -0.61 24.0 74 2 2 4 1 2 2 0  
2 1.51 1.51 36.3 -2.00 -0.63 26.2 80 7 5 3 2 1 1 0  
3 1.51 1.51 36.5 -1.99 -0.62 26.3 79 7 5 2 2 1 1 0  
4 2.61 2.77 44.1 -1.57 -0.40 16.2 78 5 3 4 2 2 1 0  
5 1.22 1.60 48.8 -1.78 -0.25 20.6 80 4 4 3 1 2 1 0  
6 1.22 1.59 76.4 -2.23 -0.55 24.0 84 7 4 7 2 1 2 0  
7 1.51 1.51 32.2 -2.24 -0.54 27.7 80 6 3 2 2 1 0 0  
8 1.52 1.52 36.6 -2.23 -0.54 28.4 81 7 4 3 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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