PDBsum entry 2ddr Go to PDB code:  Tunnel analysis for: 2ddr calculated with MOLE 2.0 PDB id 2ddr Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.43 23.2 -2.65 -0.70 28.9 89 4 1 2 0 0 0 0   2 1.14 2.23 23.3 -2.51 -0.74 27.5 84 4 2 1 0 0 0 0   3 1.23 1.43 26.6 -2.46 -0.70 26.4 91 4 1 2 0 0 0 0   4 1.23 1.43 31.4 -2.17 -0.63 24.9 84 4 2 1 1 0 0 0   5 1.19 1.31 36.1 -1.59 -0.46 24.7 81 3 4 2 2 1 0 0   6 1.20 1.32 37.2 -2.22 -0.55 26.7 88 5 3 1 0 1 0 0   7 1.20 1.32 54.3 -2.04 -0.67 18.4 84 3 5 4 1 4 1 0   8 1.20 1.32 55.6 -2.28 -0.52 21.1 81 4 5 4 0 5 0 0   9 1.20 1.32 59.0 -2.04 -0.49 20.4 82 6 3 4 1 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.