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PDBsum entry 2dda

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2dda calculated with MOLE 2.0 PDB id
2dda
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 1.75 61.5 -1.79 -0.34 22.4 85 9 1 7 2 3 1 0  
2 1.61 1.61 88.2 -1.33 -0.35 16.3 87 10 1 8 5 4 2 0  
3 1.60 2.51 29.1 -0.44 0.13 11.0 80 4 0 3 3 2 1 0  
4 1.42 2.26 26.4 -0.54 0.17 9.4 82 4 0 4 3 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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