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PDBsum entry 2dcf
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Tunnel analysis for: 2dcf calculated with  MOLE 2.0
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PDB id
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2dcf
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.25 |
1.38 |
16.9 |
-1.28 |
-0.58 |
17.4 |
88 |
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2 |
2 |
0 |
2 |
1 |
0 |
0 |
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2 |
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1.25 |
1.54 |
18.7 |
-0.99 |
-0.68 |
12.0 |
86 |
2 |
1 |
1 |
2 |
1 |
0 |
0 |
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3 |
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1.21 |
1.39 |
24.6 |
-1.00 |
0.16 |
10.2 |
82 |
0 |
3 |
3 |
3 |
3 |
0 |
0 |
ACA 501 A
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4 |
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1.24 |
1.40 |
26.9 |
0.08 |
0.44 |
4.8 |
80 |
2 |
1 |
3 |
4 |
4 |
0 |
0 |
ACA 501 A ACA 502 A
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5 |
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1.21 |
1.38 |
32.8 |
-1.04 |
0.05 |
16.9 |
82 |
3 |
3 |
1 |
3 |
3 |
0 |
0 |
ACA 501 A GOL 503 A
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6 |
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1.16 |
2.58 |
19.2 |
1.37 |
0.35 |
8.7 |
70 |
1 |
1 |
0 |
6 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program