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PDBsum entry 2dab
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Pore analysis for: 2dab calculated with MOLE 2.0
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PDB id
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2dab
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.44 |
1.46 |
27.6 |
-1.23 |
-0.26 |
16.3 |
85 |
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4 |
0 |
3 |
4 |
2 |
0 |
0 |
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PLP 285 A
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2 |
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1.16 |
1.49 |
38.8 |
-0.36 |
-0.04 |
17.3 |
78 |
6 |
2 |
0 |
8 |
1 |
0 |
0 |
PLP 285 A
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3 |
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1.14 |
1.47 |
40.1 |
-0.57 |
-0.04 |
14.7 |
83 |
5 |
1 |
3 |
9 |
2 |
0 |
0 |
PLP 285 A
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4 |
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1.15 |
1.15 |
53.3 |
-0.72 |
0.06 |
12.7 |
80 |
7 |
2 |
5 |
8 |
4 |
0 |
1 |
PLP 285 B
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5 |
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1.43 |
1.44 |
57.9 |
-1.23 |
-0.10 |
15.7 |
77 |
9 |
2 |
5 |
7 |
4 |
0 |
2 |
PLP 285 A PLP 285 B
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6 |
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1.21 |
1.19 |
99.1 |
-0.69 |
-0.04 |
14.8 |
80 |
6 |
5 |
3 |
8 |
2 |
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0 |
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7 |
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1.34 |
1.34 |
100.8 |
-1.23 |
-0.16 |
19.6 |
79 |
9 |
5 |
3 |
7 |
2 |
0 |
1 |
PLP 285 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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